Cytogenetic Analysis
In vitro cultured cells, such as induced pluripotent stem cells (iPSCs) and embryonic stem cells (ESCs), are prone to acquire genetic abnormalities. Long-term passage and genetic manipulation of cells can cause the development of such aberrations that can alter research and lead to erroneous results in subsequent experiments.
For a comprehensive examination of genomic integrity, a combination of karyotyping and array genomic hybridization (AGH) analysis is recommended. Karyotype analysis detects important balanced translocations and, as such, remains the standard template for genetic auditing required by regulatory agencies. AGH analysis provides a higher degree of resolution and can identify microdeletions that may be missed by karyotype analysis.